@edwin - It appears to not be working correctly with some browsers. We’ll take a look at this. What browser are you using, by the way?
Firefox. I is funny though, 'cos after a while, the problem is gone. This happened to me twice (in 2 different lessons).
Hello, the new popup is enjoyable, but I happen to have some difficulties with Ignore button. I marked with it words which I do not need to translate like names or words of another language.
But suddenly after I push Linqq`d button and start to work with flashcards on my iPhone (both flashcards and iLingq apps) I see ignored words in my flashcards and they do not have even buttons 1-2-3-4 to get them out.
Also I tried to refresh a web-page after I lingq-ed some words and ignored others. Then I saw ignored words in the blue. I guess there have to be a bug there. Now I avoid using ignore button because it causes troubles 
And my browser is Google Chrome stable.
@libresco - Yes, there is a bug there and an update will be pushed soon. Any words that you have ‘ignored’ will then disappear from your vocabulary list. You can continue to use the Ignore button.
I really like the new changes 